BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D06LP1|AL428715
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1470 1798 0.0
>3x_Contig1470
Length = 8270
Score = 1798 bits (907), Expect = 0.0
Identities = 907/907 (100%)
Strand = Plus / Plus
Query: 1 ctaccaaacctacctaaatgcaaacccgaagttctcatcaatagatcgaactctagtagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctaccaaacctacctaaatgcaaacccgaagttctcatcaatagatcgaactctagtagg 206
Query: 61 ggtttgctttccacatttgcttcgtatttgaagggtgatgaagaaccgacggatgaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggtttgctttccacatttgcttcgtatttgaagggtgatgaagaaccgacggatgaggaa 266
Query: 121 attcaagcctcaaccaaggcaatggagtgtatcaaaacggcaaatatttctgcttctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 attcaagcctcaaccaaggcaatggagtgtatcaaaacggcaaatatttctgcttctctt 326
Query: 181 ttcgggaatgacaagaatgttaatgacaccttaattaaactattgcttgaacacattaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcgggaatgacaagaatgttaatgacaccttaattaaactattgcttgaacacattaaa 386
Query: 241 actgaggttaacgatgataacaaaagatttttcgagccagaattgctattcctcatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actgaggttaacgatgataacaaaagatttttcgagccagaattgctattcctcatggag 446
Query: 301 ttaagtgtctccctgttcttattttgtaagaatgatgctgttttagggaaattcctgcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttaagtgtctccctgttcttattttgtaagaatgatgctgttttagggaaattcctgcta 506
Query: 361 gacaaattatcgtcaatatgccaaaatgtttctttatccaaaaatgtcattgtgagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gacaaattatcgtcaatatgccaaaatgtttctttatccaaaaatgtcattgtgagaata 566
Query: 421 atatcatacaaaattttgattatctccattttagaaaaccctgagtatgtggttaaatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atatcatacaaaattttgattatctccattttagaaaaccctgagtatgtggttaaatta 626
Query: 481 ataaacgagcagttactcacaaagaatgaagtctttgataactcgttcttcaaaagccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ataaacgagcagttactcacaaagaatgaagtctttgataactcgttcttcaaaagccaa 686
Query: 541 gcaggtgcaaacgttcttcagcgcttgttagacttagctgaaatactgaactatcagggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcaggtgcaaacgttcttcagcgcttgttagacttagctgaaatactgaactatcagggt 746
Query: 601 gcgcttcttcatgatcaaggattctggaagctattgagaaagtacgcggcgttaggcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gcgcttcttcatgatcaaggattctggaagctattgagaaagtacgcggcgttaggcact 806
Query: 661 ccttcaaaccaagtttatgtctttttggacacatctgtgatgaaaaagaaaaacatgatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ccttcaaaccaagtttatgtctttttggacacatctgtgatgaaaaagaaaaacatgatc 866
Query: 721 gatgatgtgaacttcatgtgggttctcgggctgttcgatgaaatgtcttctgttggagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gatgatgtgaacttcatgtgggttctcgggctgttcgatgaaatgtcttctgttggagct 926
Query: 781 gttggaagtcagtgggaagaacaatacaataatcttgtgaagactggtcataaagtcgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gttggaagtcagtgggaagaacaatacaataatcttgtgaagactggtcataaagtcgat 986
Query: 841 aaagagaatccctatcaagaaatagttgaactatctctcaaatctatcaatttaactaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 aaagagaatccctatcaagaaatagttgaactatctctcaaatctatcaatttaactaca 1046
Query: 901 catcttc 907
|||||||
Sbjct: 1047 catcttc 1053
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7881
Number of Sequences: 1807
Number of extensions: 7881
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)